[BioC] affylmGUI error

Glyn Bradley gbradley at mycib.ac.uk
Wed Jun 3 18:00:09 CEST 2009

Hi all
I've seen this asked before in relation to limma but I couldn't find an 
answer so...

I'm getting this warning 8 times in the R console when I quit out of 
affylmGUI after computing contrasts and exporting toptables

In ebayes(fit = fit, proportion = proportion, stdev.coef.lim = 
stdev.coef.lim) :
  Estimation of var.prior failed - set to default value

Anyone have any idea what it means?.


Glyn Bradley
(postdoc at mycib.ac.uk)

Dr Glyn Bradley
Postdoctoral Research Fellow - Bioinformatics and Systems Modelling
Multidisciplinary Centre for Integrative Biology (MyCIB)
University of Nottingham

This message has been checked for viruses but the contents of an attachment
may still contain software viruses, which could damage your computer system:
you are advised to perform your own checks. Email communications with the
University of Nottingham may be monitored as permitted by UK legislation.

More information about the Bioconductor mailing list