[BioC] Merging RandData object with names on the IRanges part

[Ulrike Goebel]

Sorry,  I guess this was a clash with the old version that was still 
installed. After removing it, and also removing all .Rnw files from the 
/doc directory, I could build and install it.  And now the rbind works !

Have a nice weekend

Ulrike



Ulrike Goebel wrote:
> Hi Patrick,
>
> just to inform you: I have checked out IRanges 1.3.58 from svn, but 
> building fails in the vignettes part:
>
> svn co --username=readonly --password=readonly 
> https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/IRanges
> R CMD build IRanges
> ...
> ** building package indices ...
> * DONE (IRanges)
> * creating vignettes ... ERROR
>
> Attaching package: 'IRanges'
>
>
>        The following object(s) are masked from package:base :
>
>         cbind,
>         duplicated,
>         Map,
>         mapply,
>         order,
>         pmax,
>         pmax.int,
>         pmin,
>         pmin.int,
>         rank,
>         rbind,
>         rep.int,
>         sapply,
>         sort,
>         table,
>         unique
>
>
> Error: processing vignette 'IRangesOverview.Rnw' failed with diagnostics:
> chunk 33 (label=ranges-reduce)
> Error in extraArgsAsList(valid_argnames, ...) :
>  could not find function "anyDuplicated"
> Execution halted
>
> Best, Ulrike 
-- 
  Dr. Ulrike Goebel
  Bioinformatics Support
  Max-Planck Institute for Plant Breeding Research
  Carl-von-Linne Weg 10
  50829 Cologne
  Germany
  +49(0) 221 5062 121