[BioC] Regarding Agi4x44PreProcess

[Tobias Straub]

Hi Sikha,

posting the command that caused the error and also the error message  
would be helpful. In addition the output of sessionInfo() could help  
to identify problems with potentially outdated versions of your R  
packages.

afaik Agi4x44PreProcess calls the read.maimages function of the limma  
package to read the files. could you test if read.maimages(filename,  
source="agilent) works for you?

best
Tobias

On Aug 19, 2009, at 6:09 AM, shikha sinha wrote:

> Hi,
>
> I am using Agi4x44PreProcess for preprocessing my agilent microarray  
> data. I have extracted data using Feature Extraction v10.5. So,  
> Agi4x44PreProcess is unable to read my raw data, But in Help Pdf it  
> has been written there that we can use it for FE 9.5 and later on  
> versions of FE.
>
> Please Help me
>
> Thanks,
> Sikha
>
>
>
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----------------------------------------------------------------------
Tobias Straub   ++4989218075439   Adolf-Butenandt-Institute, München D