[BioC] makecdfenv's error (with MoGene-1_0-st-v1.r3.cdf)

[Robert Gentleman]

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Peng Yu wrote:
> Hi,
> 
> I downloaded MoGene-1_0-st-v1.r3.cdf from
> http://www.affymetrix.com/products_services/arrays/specific/mousegene_1_st.affx#1_4
> 
> Then, I run the following command in R.
> 
> library("makecdfenv")
> make.cdf.package("~/download/MoGene-1_0-st-v1.r3.unsupported-cdf/MoGene-1_0-st-v1.r3.cdf",
> species="Mus_musculus")
> 
> But I got the following error.
> 
> Error in isCDFXDA(file.path(path.expand(cdf.path), filename)) :
>   VECTOR_ELT() can only be applied to a 'list', not a 'character'
> Calls: make.cdf.package -> make.cdf.env -> isCDFXDA -> .Call
> Execution halted
> 
> Can somebody let me what the problem is? Do I call the command incorrectly?
> 
> Regards,
> Peng
> 
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-- 
Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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rgentlem at fhcrc.org