[BioC] P-values returned from siggenes's sam() function

[Michal Blazejczyk]

Hi everyone,

I have a fairly technical question.  We are calling the sam() function from packages siggenes:
  result <- sam( ...... )
and then getting the p-values like this:
  result at p.value

The Help for function sam() says that these are "raw, unadjusted p-values of the genes".

Does it mean an FDR function such as mt.rawp2adjp() from multtest can be safely used on these values?

Best,
Michal Blazejczyk
FlexArray Lead Developer