[BioC] crlmm and Illumina Infinium arrays
Christian Ruckert
cruckert at uni-muenster.de
Wed Apr 29 17:32:47 CEST 2009
I am trying to get copy number estimates for Illumina 660W-Quad and
CytoSNP-12 bead arrays with package crlmm.
I have successfully read in the *.idat files. But when continuing the
crlmmIllumina function requires the specification of a chip description
file. Are these files yet available somewhere? All I have are the
manifest files (*.bpm) from GenomeStudio.
Regards,
Christian
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