[BioC] heatmap algorithm?
Yannick Wurm
yannick.wurm at unil.ch
Wed Oct 29 14:23:19 CET 2008
Try setting the option Colv=NA as in:
heatmap(fitMvsMT0$coefficients[myGenes,], Colv=NA)
and ?heatmap
you may also find that heatmap.2 which you can get in the gplots
library is more flexible/prettier
best,
yannick
--------------------------------------------
yannick . wurm @ unil . ch
Ant Genomics, Ecology & Evolution @ Lausanne
http://www.unil.ch/dee/page28685_fr.html
On Oct 29, 2008, at 14:09 , Michaela Oswald wrote:
> Hi!
>
> I am new to bioconductor: what bi-clustering algorithm is behind the
> function "heatmap"? Plus, is it possible to enforce that the order of
> timepoints remains intact?
>
> Thanks, Michaela
>
>
> ###
> "A new scientific truth does not triumph by convincing its opponents
> and making them see the light, but rather because its opponents
> eventually die and a new generation grows up that is familiar with
> it."
>
> -- Max Planck
>
>
>
>
>
>
>
>
>
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/
> gmane.science.biology.informatics.conductor
More information about the Bioconductor
mailing list