[BioC] heatmap algorithm?

Yannick Wurm yannick.wurm at unil.ch
Wed Oct 29 14:23:19 CET 2008


Try setting the option Colv=NA as in:
heatmap(fitMvsMT0$coefficients[myGenes,], Colv=NA)

and ?heatmap

you may also find that heatmap.2 which you can get in the gplots  
library is more flexible/prettier

best,

yannick


--------------------------------------------
          yannick . wurm @ unil . ch
Ant Genomics, Ecology & Evolution @ Lausanne
   http://www.unil.ch/dee/page28685_fr.html


On Oct 29, 2008, at 14:09 , Michaela Oswald wrote:

> Hi!
>
> I am new to bioconductor: what bi-clustering algorithm is behind the
> function "heatmap"? Plus, is it possible to enforce that the order of
> timepoints remains intact?
>
> Thanks, Michaela
>
>
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