atarca at med.wayne.edu
Fri May 30 19:02:50 CEST 2008
I created the packed using SQLForge. It was really helpful your advice.
From: Marc Carlson [mailto:mcarlson at fhcrc.org]
Sent: Friday, May 30, 2008 12:17 PM
To: Tarca, Adi
Cc: bioconductor at stat.math.ethz.ch
Subject: Re: [BioC] HumanRef-8_V3
Tarca, Adi wrote:
> Hi all,
> Did anyone make a package for the Illumina HumanRef-8_V3 array?
> I have tried both lumiHumanAll.db and illuminaHumanv3ProbeID.db but
> no not recognize the IDs on this array.
> Adi Tarca
If you need an annotation package other than the ones we provide, you
can use the SQLForge function in AnnotationDbi to quickly make one. All
you need is the IDs that you want to use paired up with some standard ID
type (entrez gene, unigene, refseq etc.) in a tab delimited format and
you can make your own annotation package on any of the supported
organisms (human, rat mouse etc.). You can see the vignette here for
More information about the Bioconductor