[BioC] HumanRef-8_V3

[Marc Carlson]

Tarca, Adi wrote:
> Hi all,
>
> Did anyone make a package for the Illumina HumanRef-8_V3 array?
> I have tried both lumiHumanAll.db and illuminaHumanv3ProbeID.db but they
> no not recognize the IDs on this array.
>
> Thanks,
>
> Adi Tarca
>   

If you need an annotation package other than the ones we provide, you 
can use the SQLForge function in AnnotationDbi to quickly make one.  All 
you need is the IDs that you want to use paired up with some standard ID 
type (entrez gene, unigene, refseq etc.) in a tab delimited format and 
you can make your own annotation package on any of the supported 
organisms (human, rat mouse etc.).  You can see the vignette here for 
more information:

http://www.bioconductor.org/packages/2.2/bioc/html/AnnotationDbi.html


    Marc