[BioC] affxparser: writeTpmap error (in as.vector(y))

[Kasper Daniel Hansen]

This function is broken and (consulting svn) has been broken for a  
long time. A fix is reasonably easy, I will commit something later  
today. Thanks for the report.

Kasper

On May 20, 2008, at 9:52 AM, Andreas Heinzel wrote:

> hi,
>
> i'm trying to use readBpmap to read an affymetrix bpmap file and  
> writeTpmap to save it as text-bpmap file.
>
> reading seems to work fine, but the writeTpmap function dies with  
> the following error:
> Writing sequence AffxCtrl:v1;r2_Tag
> Fehler in as.vector(y) : Argument "y" fehlt (ohne Standardwert)
>
> i'm using:
> R 2.7 on Mac
> affxparser 1.12.2
>
> tried:
> GeneChip Drosophila Tiling 1.0R Array
> Dm35b_MF_v02-3_BDGPv4h.bpmap (http://www.affymetrix.com/Auth/support/downloads/library_files/drosophila_tiling1r_libraryfile.zip 
> )
> GeneChip Chromosome 21/22 1.0 Array Set
> Chrom21_22B_F_v04-2_NCBIv30.bpmap
> (http://www.affymetrix.com/Auth/support/downloads/library_files/chrom21_22_libraryfile.zip 
> )
>
> Best regards
> Andreas
>
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