[BioC] GO.db
Heike Pospisil
pospisil at zbh.uni-hamburg.de
Fri Jun 20 13:42:29 CEST 2008
Dear Bioconductors,
I am going to use GO annotation libraries. Unfortunately, I did not succed in
loading the package GO.db. I have got the following error message:
Error in checkDBSCHEMA(dbconn, "GO_DB") :
invalid DB schema version (found 0.9, expected 1.0)
Error : .onLoad failed in 'loadNamespace' for 'GO.db'
Error: package/namespace load failed for 'GO.db'
Does someone know which package is needed or what is going wrong with my
libraries? The sessionInfo is given at the end of this email.
Thanks and best wishes,
Heike
#################
sessionInfo()
R version 2.7.0 (2008-04-22)
i686-pc-linux-gnu
locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C
attached base packages:
[1] tools stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] AnnotationDbi_1.2.2 RSQLite_0.6-9 DBI_0.2-4
[4] Biobase_2.0.1
--
Dr. Heike Pospisil | pospisil at zbh.uni-hamburg.de
University of Hamburg | Center for Bioinformatics
Bundesstrasse 43 | 20146 Hamburg, Germany
phone:+49-40-42838-7303 | fax: +49-40-42838-7312
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