[BioC] GO categories: how to extract a specific rank of the category-tree

Johannes Graumann johannes_graumann at web.de
Wed Jun 18 16:27:27 CEST 2008


Hi all,

Can anyone point me into the direction on how to achieve the subject line? 
I'm using right now the "CustomEndNodeList" from "goTools", retrieve two
consecutive ranks and accept only what I retrieve with the higher rank and
not with the lower ... but GO has rank-skipping connections and I would
prefer to really be able to slice the tree at level x below ID y while
disregarding those ...

Thanks for any pointers, Joh



More information about the Bioconductor mailing list