[BioC] oligo and pd.genomewidesnp.6_0

[Morten Mattingsdal]

Hi,

Ive just intstalled a fresh version of R 2.7.0 and want to run CRLMM on 
~780 Affymetrix chips.
When installing the subsequent platform design "pd.genomewidesnp.6_0" I 
get the following errors:

R CMD INSTALL pd.genomewidesnp.6_0.4.2.tar.gz
tar: pd.genomewidesnp.6/inst/extdata/pd.genomewidesnp.6.sqlite: Wrote 
only 1024 of 10240 bytes
tar: Skipping to next header
tar: Archive contains obsolescent base-64 headers
tar: pd.genomewidesnp.6/inst/UnitTests: Cannot mkdir: No space left on 
device
tar: pd.genomewidesnp.6/inst/UnitTests/crlmm_test.R: Cannot open: No 
such file or directory
tar: pd.genomewidesnp.6/inst/UnitTests/runfile.sh: Cannot open: No such 
file or directory
tar: pd.genomewidesnp.6/inst/UnitTests/Makefile: Cannot open: No such 
file or directory
tar: pd.genomewidesnp.6/inst/UnitTests/checkTables_test.R: Cannot open: 
No such file or directory
tar: pd.genomewidesnp.6/inst/UnitTests/runalltests.R: Cannot open: No 
such file or directory
tar: pd.genomewidesnp.6/inst/UnitTests/runall.sh: Cannot open: No such 
file or directory
tar: pd.genomewidesnp.6/R: Cannot mkdir: No space left on device
tar: pd.genomewidesnp.6/R/all.R: Cannot open: No such file or directory
tar: Error exit delayed from previous errors
Fatal error: cannot mkdir R_TempDir
* Installing to library ''
ERROR: cannot write to or create directory '

My harddisk is not full, so I wounder if this version 
pd.genomewidesnp.6_0 is broken. (pd.genomewidesnp.6_0.4.2.tar.gz)
morten




 > sessionInfo()
R version 2.7.0 (2008-04-22)
x86_64-unknown-linux-gnu

locale:
LC_CTYPE=en_US;LC_NUMERIC=C;LC_TIME=en_US;LC_COLLATE=en_US;LC_MONETARY=C;LC_MESSAGES=en_US;LC_PAPER=en_US;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US;LC_IDENTIFICATION=C

attached base packages:
[1] splines   tools     stats     graphics  grDevices utils     datasets
[8] methods   base    

other attached packages:
[1] oligo_1.4.0          oligoClasses_1.2.0   affxparser_1.12.2  
[4] AnnotationDbi_1.2.1  preprocessCore_1.2.0 RSQLite_0.6-9      
[7] DBI_0.2-4