[BioC] makePDpackage affy drosophila tiling 1 array

[Tobias Straub]

Hi Steve!

thanks a lot. seems to work. guess the secret of your sauce was not  
osx universal binary.

best
Tobias


On Jun 15, 2008, at 4:12 PM, Steve Lianoglou wrote:

> Hi Dr. Straub,
>
> On Jun 14, 2008, at 7:31 AM, Tobias Straub wrote:
>
>> Dear all,
>>
>> i tried to create a PD design for the affy drosphila tiling 1 array  
>> but failed due to memory allocation errors (running dual quad mac  
>> pro with 18 GB RAM.. wondering).
>>
>> Anyone in here managed to create this package and willing to  
>> contribute?
>
> I've previously been able to make PD designs for both the v1 MF and  
> the MR chips. I'm not sure what the secret sauce was, but I built  
> them on our "big iron" servers (64gb ram :-) .. I'd be surprised if  
> the 18gb ram you have wouldn't be sufficient, though.
>
> I'm not sure what's going south with your build, but in the meantime  
> you can find the ones that I've built here:
>
> http://cbio.mskcc.org/~lianos/files/bioconductor/
>
> They've been built on a 64-bit linux machine. I'm not sure if that's  
> going to affect you or not.
>
> HTH,
> -steve

======================================================================
Dr. Tobias Straub         Adolf-Butenandt-Institute, Molecular Biology
tel: +49-89-2180 75 439         Schillerstr. 44, 80336 Munich, Germany