[BioC] MTP error
Boel Brynedal
boel.brynedal at ki.se
Thu Nov 15 14:33:20 CET 2007
Dear List,
I am trying to use the MTP function in the multtest package. I get the
following error:
> mtp<-MTP(X=exprs(eS), Y=groupMO, test="t.twosamp.unequalvar",
robust=FALSE, typeone="fdr", method="sd.minP")
running bootstrap...
iteration = 100 200 300 400 500 600 700 800 900 1000
Error in pmin(na.rm, ...) : cannot mix 0-length vectors with others
Can anyone see what I am doing wrong? Any tips will be appreciated.
> sessionInfo()
R version 2.5.0 (2007-04-23)
x86_64-unknown-linux-gnu
attached base packages:
[1] "grid" "splines" "tools" "stats" "graphics"
"grDevices"
[7] "utils" "datasets" "methods" "base"
other attached packages:
multtest annaffy KEGG GO simpleaffy genefilter
"1.14.0" "1.8.1" "1.16.1" "1.16.0" "2.10.31" "1.14.1"
survival IDPmisc lattice affyPLM gcrma matchprobes
"2.31" "0.9.1" "0.15-6" "1.12.0" "2.8.1" "1.8.1"
affydata affy affyio Biobase
"1.11.2" "1.14.1" "1.4.0" "1.14.0"
Best regards,
Boel Brynedal, PhD student, Karolinska Institutet, Sweden
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