[BioC] problems with library goCluster

[James W. MacDonald]

Hi Caroline,

Caroline Reiff wrote:
> Hi,
> I am currently trying to learn about the various GO tool packages in 
> bioconductor following the examples in 
> http://faculty.ucr.edu/~tgirke/Documents/R_BioCond/R_BioCondManual.html#biocon_affy.
> While I had some success with GOstats, GOHyperGAll  and goTools, I am 
> having difficulties with goCluster. When I try to load the library 
> via biocLite (see below) I get the following:
> 
> 
>  >source("http://www.bioconductor.org/biocLite.R")
>  >biocLite("goCluster")
> Running getBioC version 0.1.8 with R version 2.4.0
> Running biocinstall version 1.9.9 with R version 2.4.0
> Your version of R requires version 1.9 of Bioconductor.
> dependency ''goCluster'' is not available
>  >
> 
> can anybody tell me what is going on here?

goCluster is no longer supported by its author, and is no longer part of 
BioC. Evidently it has been superceded by AMEN:

http://www.biozentrum.unibas.ch/primig/amen/

Best,

Jim


> Many thanks Caroline
> 
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-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623


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