[BioC] getGEO invalid multibyte string

Tobias Straub tstraub at med.uni-muenchen.de
Fri Aug 31 14:17:45 CEST 2007


I tried to fetch and parse the GSE94 series from GEO using GEOquery  
library (gse<-getGEO('GSE94')). Operation is aborted with the message:

Error in make.names(as.character(names), allow_) :
	invalid multibyte string 29
In addition: There were 12 warnings (use warnings() to see them)

is that an error of getGEO or a problem of the data set?

Tobias

 > sessionInfo()
R version 2.5.1 (2007-06-27)
i386-apple-darwin8.9.1

locale:
en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] "stats"     "graphics"  "grDevices" "utils"     "datasets"   
"methods"   "base"

other attached packages:
GEOquery
"2.0.6"


======================================================================
Dr. Tobias Straub         Adolf-Butenandt-Institute, Molecular Biology
tel: +49-89-2180 75 439         Schillerstr. 44, 80336 Munich, Germany



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