[BioC] biomaRt question
Steffen
sdurinck at lbl.gov
Wed Aug 29 22:23:51 CEST 2007
Hi Zhu,
There is nothing wrong with your code. Unfortunately the Ensembl
servers are having problems today and we can't do queries. I mailed the
Ensembl helpdesk a few hours ago and this was their response:
"We are currently experiencing problems derived from a serious power
failure in the region, we are working to restore our service, please
bear with us."
So we have to wait and see. This is the first time they have been down
this long as far as I know.
Cheers,
Steffen
Zhu, Dongxiao wrote:
> Hello everyone,
>
> I have a question of using biomaRt package to retriveve affy IDs from
> entrez gene IDs. The following is my code but it returns nothing. Can
> somebody help? Many thanks.
>
> library(biomaRt)
> ensembl = useMart("ensembl")
> ensembl = useDataset("hsapiens_gene_ensembl",mart=ensembl)
> hh.affy <- getBM(attributes= "affy_hg_u133a", filters= "entrezgene",
> value = c("891", "983"), mart = ensembl)
>
> Dongxiao Zhu
>
> [[alternative HTML version deleted]]
>
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