[BioC] Extract raw numerical data from a flowframe?

M. Jankowski mjankowski at gmail.com
Sat Aug 11 20:27:48 CEST 2007


No, thank you!

On 8/11/07, Nolwenn LeMeur <nlemeur at fhcrc.org> wrote:
> Hi Matt,
>
> To access the data in a flowFrame object you have to use the exprs()
> function:
> exprs(fs[[1]])[,1]
> or
> exprs(fs[[1]])[,"FSC.H"]
>
> This method is explained in the vignette but it is true that no example
> is given. We will fix that.
>
> Thanks
> Nolwenn
>
> M. Jankowski wrote:
>
> >Hi All,
> >
> >I've been looking for a way to extract the raw numerical data from a flowset.
> >
> >If a flowframe in the flowset, fs, contains a column called 'FSC.H'
> >how would I extract the actual numerical values of 'FSC.H' from the
> >first flowframe and put them into a vector/array?
> >
> >I've tried fs[[1]]$FSC.H and fs[[1]]$'FSC.H' but to no effect.
> >
> >I've looked through the help materials and cannot find an example that
> >does this. Any help is appreciated!
> >
> >Thanks,
> >Matt
> >
> >_______________________________________________
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> >Bioconductor at stat.math.ethz.ch
> >https://stat.ethz.ch/mailman/listinfo/bioconductor
> >Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
> >
> >
>
>



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