[BioC] rbind of MALists

Matthew Scholz schmatthew at gmail.com
Tue Jun 13 00:20:24 CEST 2006


Hi all,

I'm trying to combine two MALists, named RGAmodel and RGBmodel, using
rbind and am running into the following problem:

> rbind(RGAmodel, RGBmodel)
Error in match.names(clabs, names(xi)) : names don't match previous names:
        Name
In addition: Warning message:
longer object length
        is not a multiple of shorter object length in: clabs == nmi

I checked that the names were the same for each object and that the
classes and dimensions match:

> names(RGAmodel)
[1] "weights"     "targets"     "genes"       "source"      "printer"
[6] "genesStatus" "M"           "A"
> names(RGBmodel)
[1] "weights"     "targets"     "genes"       "source"      "printer"
[6] "genesStatus" "M"           "A"

> class(RGAmodel)
[1] "MAList"
attr(,"package")
[1] "limma"

> class(RGBmodel)
[1] "MAList"
attr(,"package")
[1] "limma"

> dim(RGAmodel)
[1] 32448    32

> dim(RGBmodel)
[1] 32448    32

What am I doing wrong? I'm using R2.3.0 and Bioconductor 1.7

Thanks,

Matt

-- 
Matt Scholz
Senior Research Specialist
Department of Plant Sciences
University of Arizona
(520) 621-1695



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