[BioC] Error loading, on Bioconductor 1.8, exprSet generated with bioconductor 1.7
mtmorgan at fhcrc.org
Wed Jun 7 18:10:18 CEST 2006
Can you provide just a bit more information? What's the result of
Also, I suspect that tr7.rma was created not in the last release of
Biobase, but the release before that (at least). I say this because
the 'reporterInfo' slot was present in the 1.7 release.
In the mean time, I suspect that
will display the contents of your object.
rcaloger <raffaele.calogero at unito.it> writes:
> today I was working on an Affy exprSet I saved before the new release of
> Bioconductor (1.8).
> I loaded it but I got the following error when I tried to show it:
> Error in slot(object, what) : no slot of name "pubMedIds" for this
> object of class "MIAME"
> Furthermore, if I issue the command:
> I got this error:
> Error in FUN(X[], ...) : no slot of name "reporterInfo" for this
> object of class "exprSet"
> I was expecting that there should be some sort of back compatibility
> with at least the previous release of the exprSet.
> The error comes using the Biobase Version: 1.10.0.
> There is any way to fix the problem or Do I have to install again the
> old release of Bioconductor?
> Prof. Raffaele A. Calogero
> Bioinformatics and Genomics Unit
> Dipartimento di Scienze Cliniche e Biologiche
> c/o Az. Ospedaliera S. Luigi
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> 10043 Torino
> tel. ++39 0116705420
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> email: raffaele.calogero at unito.it
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