[BioC] Error loading, on Bioconductor 1.8, exprSet generated with bioconductor 1.7
rcaloger
raffaele.calogero at unito.it
Wed Jun 7 10:02:47 CEST 2006
Hi,
today I was working on an Affy exprSet I saved before the new release of
Bioconductor (1.8).
I loaded it but I got the following error when I tried to show it:
library(affy)
load("tr7.rma.rda")
tr7.rma
Error in slot(object, what) : no slot of name "pubMedIds" for this
object of class "MIAME"
Furthermore, if I issue the command:
str(tr7.rma)
I got this error:
Error in FUN(X[[6]], ...) : no slot of name "reporterInfo" for this
object of class "exprSet"
I was expecting that there should be some sort of back compatibility
with at least the previous release of the exprSet.
The error comes using the Biobase Version: 1.10.0.
There is any way to fix the problem or Do I have to install again the
old release of Bioconductor?
Thanks
Raf
--
----------------------------------------
Prof. Raffaele A. Calogero
Bioinformatics and Genomics Unit
Dipartimento di Scienze Cliniche e Biologiche
c/o Az. Ospedaliera S. Luigi
Regione Gonzole 10, Orbassano
10043 Torino
tel. ++39 0116705420
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email: raffaele.calogero at unito.it
www: www.bioinformatica.unito.it
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