[BioC] error message in gcrma

Mohammad Esad-Djou shahrgol at web.de
Mon Jun 5 20:14:28 CEST 2006


> What you can do is to download the source packages that you want and
> then transfer them to your Linux system.  You can install source
> packages on Linux using:
> 
> R CMD INSTALL  somepkg_1.2.3.tar.gz
> 
> However, you will have to resolve package dependencies yourself.  This
> is unfortunate and something I'm interested in improving with some
> alternate dependency tracking tools.

I know, but I do not know, which Package needs gcrma! 



> -----Ursprüngliche Nachricht-----
> Von: Seth Falcon <sfalcon at fhcrc.org>
> Gesendet: 05.06.06 20:04:12
> An: Mohammad Esad-Djou <shahrgol at web.de>
> Betreff: Re: [BioC] error message in gcrma


> Mohammad Esad-Djou <shahrgol at web.de> writes:
> 
> > Thanks for your answer.
> >
> >
> >> Are you able to connect to the Bioconductor website from a web
> >> browser on this system?  Is there a web proxy that is preventing R
> >> from accessing the internet?
> >
> > Unfortunately I have not Internet connection under Linux. I must
> > install relevant libraries manual.  Do you have a solution under such
> > situation?
> 
> Without a connection to the internet, biocLite will not be of use.
> 
> What you can do is to download the source packages that you want and
> then transfer them to your Linux system.  You can install source
> packages on Linux using:
> 
> R CMD INSTALL  somepkg_1.2.3.tar.gz
> 
> However, you will have to resolve package dependencies yourself.  This
> is unfortunate and something I'm interested in improving with some
> alternate dependency tracking tools.
> 
> + seth


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