[BioC] Drosophila Genome 2.0 annaffy annotation

Seth Falcon sfalcon at fhcrc.org
Wed Jul 26 22:59:30 CEST 2006

"James W. MacDonald" <jmacdon at med.umich.edu> writes:
> Well, it is supposed to. Unfortunately, there is a small bug there that 
> is keeping things from working correctly (fixed in the devel
> repository).

Any volunteers for fixing this in the release?  

> Anyway, you can do one of two things.
> library(reposTools)
> Symbol <- aafSymbol(geneIDs, "drosophila2")

I do not recommend this approach.  reposTools is deprecated.  Try the
biocLite approach:

> source("http://www.bioconductor.org/biocLite.R")
> biocLite("drosophila2")
> Symbol <- aafSymbol(geneIDs, "drosophila2")


+ seth

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