[BioC] bioconductor and ESS

[A.J. Rossini]

I really think Wolfgang is correct -- that particular command
shouldn't be doing anything to change results within or without of
Emacs.

Please verify versions of the programs (do you have multiple R's on
your laptop?)

best,
-tony


On Wed, 09 Mar 2005 15:10:53 +0000, Wolfgang Huber <huber at ebi.ac.uk> wrote:
> Hi Patrick,
> 
> are you sure that you are actually using the same versions of R when you
> call Rgui versus ESS? Perhaps your emacs accesses an old version of R
> that is still lying around somewhere on your computer.
> 
>  Bw
>  Wolfgang
> 
> 
> Patrick Brown wrote:
> > Hello.  bioconductor behaves strangely when I run R through emacs using
> > ESS.  I'm using R 2.0.1 with windows XP.
> > using the R gui I get
> >
> >  > temp=new("phenoData")
> >  > validObject(temp)
> > [1] TRUE
> >
> > but in emacs I get
> >
> >  > temp=new("phenoData")
> >  > validObject(temp)
> > Error in validityMethod(object) : No slot of name "phenoLabels" for this
> > object of class "phenoData"
> >
> > so I'll use the R gui from now on, but I just wanted to point this out.
> 
> -------------------------------------
> Wolfgang Huber
> European Bioinformatics Institute
> European Molecular Biology Laboratory
> Cambridge CB10 1SD
> England
> Phone: +44 1223 494642
> Fax:   +44 1223 494486
> Http:  www.ebi.ac.uk/huber
> 
> _______________________________________________
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> 


-- 
best,
-tony

"Commit early,commit often, and commit in a repository from which we can easily
roll-back your mistakes" (AJR, 4Jan05).

A.J. Rossini
blindglobe at gmail.com