[BioC] bioconductor and ESS

[Wolfgang Huber]

Hi Patrick,

are you sure that you are actually using the same versions of R when you 
call Rgui versus ESS? Perhaps your emacs accesses an old version of R 
that is still lying around somewhere on your computer.

  Bw
  Wolfgang


Patrick Brown wrote:
> Hello.  bioconductor behaves strangely when I run R through emacs using 
> ESS.  I'm using R 2.0.1 with windows XP.
> using the R gui I get
> 
>  > temp=new("phenoData")
>  > validObject(temp)
> [1] TRUE
> 
> but in emacs I get
> 
>  > temp=new("phenoData")
>  > validObject(temp)
> Error in validityMethod(object) : No slot of name "phenoLabels" for this 
> object of class "phenoData"
> 
> so I'll use the R gui from now on, but I just wanted to point this out.


-------------------------------------
Wolfgang Huber
European Bioinformatics Institute
European Molecular Biology Laboratory
Cambridge CB10 1SD
England
Phone: +44 1223 494642
Fax:   +44 1223 494486
Http:  www.ebi.ac.uk/huber