[BioC] Puzzled with htmlpage
Fatima Nunez
fnunez at vhebron.net
Fri Apr 8 18:44:39 CEST 2005
Dear all,
There is something that is puzzling me. I am trying to create an html page
with some results I have. These are the 42 LocusID entries:
> mylistLI
$"1554018_at"
[1] 10457
$"1566557_at"
[1] 440465
$"202270_at"
[1] 2633
$"202555_s_at"
[1] 4638
$"202637_s_at"
[1] 3383
$"202748_at"
[1] 2634
$"203717_at"
[1] 1803
$"204181_s_at"
[1] 23099
$"204806_x_at"
[1] 3134
$"204963_at"
[1] 8082
$"205170_at"
[1] 6773
$"205227_at"
[1] 3556
$"206544_x_at"
[1] 6595
$"210785_s_at"
[1] 9473
$"211478_s_at"
[1] 1803
$"211965_at"
[1] 677
$"212959_s_at"
[1] 79158
$"213645_at"
[1] 55556
$"214978_s_at"
[1] 8497
$"217234_s_at"
[1] 7430
$"218136_s_at"
[1] 51312
$"218211_s_at"
[1] 79083
$"219872_at"
[1] 51313
$"221920_s_at"
[1] 51312
$"221986_s_at"
[1] 54800
$"223495_at"
[1] 83987
$"223679_at"
[1] 1499
$"224823_at"
[1] 4638
$"225051_at"
[1] 2035
$"225564_at"
[1] 221178
$"226001_at"
[1] 51088
$"226363_at"
[1] 10057
$"226676_at"
[1] 25925
$"227565_at"
[1] 51088
$"227741_at"
[1] 201562
$"228030_at"
[1] 10180
$"229441_at"
[1] 8322
$"231721_at"
[1] 83700
$"232898_at"
[1] 1601
$"236488_s_at"
[1] 440259
$"241359_at"
[1] NA
$"243041_s_at"
[1] 27303
When I try:
>htmlpage(mylistLI, filename = "mylist.html",
title = "mylist", table.center = TRUE)
I obtain an html page with just the first entry:
Differentially Expressed Genes
mylist
10457
However, if I do
>htmlpage(1:42, filename = "mylist.html",
title = "mylist", table.center = TRUE)
I obtain, as expected:
Differentially Expressed Genes
mylist
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
I have read the help available through ?htmlpage but could not find the
likely cause - I admit my R knowledge is very poor. It seems to me I'm
missing something extremely easy and if so, please excuse my ignorance.
Could you help me? I wasn't sure whether this was a posting for R or BioC.
If you consider I got it wrong, I apologize in advance.
I have just installed R 2.0.1, BioConductor 1.5 and I'm using Windows XP
Thanks in advance,
Fatima
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