[BioC] pamr.from.excel problem

[Willy Wynant]

Hello everybody,

I have encountered a problem with the pamr.from.excel function.

When I try to perform this function on my file it seems that I have 781 
genes whereas my files has 1000 genes. When I compare the geneid 
obtained and those who are present in my file I make the remark that 
some genes have been removed by groups of around 20. I mean that I have 
the 100 first genes and then the 20 following genes are removed and so 
on..... I really don't understand what happened !


For details I had :
  data<-pamr.from.excel("file.txt",90,sample.labels=TRUE,batch.labels=FALSE)
Read 70470 items
Read in  781 genes
Read in  88 samples
Read in  88 sample labels
Make sure these figures are correct!!

Could you help me ?
Thank you,

Regards

Willy