[BioC] simpleaffy error for mouse4302cdf

[Dick Beyer]

I am unable to use the qc.stats function because of the following error:


> qc <- qc.stats(gclmko.raw,gclmko.mas5)
Getting probe level data...
Computing p-values
Doing PMA Calls
Error in qc.stats(gclmko.raw, gclmko.mas5) : 
        Sorry - I'm afraid I don't know about the spike probes on ' mouse4302cdf ' arrays.
> 

I guess this is from no annotation package available for moe430_2 arrays.


I am using Windows 2000 with the following:

base 1.9.0 
utils 1.9.0 
graphics 1.9.0 
stats 1.9.0 
methods 1.9.0 
affy 1.4.23 
Biobase 1.4.10 
tools 1.9.0 
gcrma 1.0.6 
simpleaffy 1.09 
tkWidgets 1.3.14 
DynDoc 1.3.11 
widgetTools 1.2.2 
tcltk 1.9.0 
reposTools 1.3.12 
mouse4302cdf 1.4.1 
mouse4302probe 1.0 
matchprobes 1.0.2 
xtable 1.2-1 

Thanks,
Dick
*******************************************************************************
Richard P. Beyer, Ph.D.	University of Washington
Tel.:(206) 616 7378	Env. & Occ. Health Sci. , Box 354695
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			Seattle, WA 98105-6099
http://depts.washington.edu/ceeh/ServiceCores/FC5/FC5.html