[BioC] Recent changes to Bioconductor packages
madman at jimmy.harvard.edu
madman at jimmy.harvard.edu
Sat Jan 17 11:00:02 MET 2004
This is an automated message sent out weekly to report recent changes
to Bioconductor packages. Please see the URL
http://www.bioconductor.org/changelog.html for a complete history of
changes. Unless otherwise noted, these changes apply to the developmental
packages only.
-----------------------------------------------------------------------
12 Jan 2003 - affyPLM 1.1.0 BMB
many major changes including:
PLMset-class has new attributes: residuals, varcov
image() on a PLMset can now plot residuals and possible to add legend bars. Some major changes in how parameters are passed in some of the C code
routines in the fitPLM process
conversion function pset2eset() which converts a PLMset to an exprSet
rmaPLM() function lets you fit the rma model as a PLMset.
weights/residuals allow you to index probes from specific probesets
More information about the Bioconductor
mailing list