[BioC] [mArray] scale for spatial plots

[Sean Davis]

Sorry.  The xlim from below should read zlim.  Too early!

Sean

On 1/14/04 7:35 AM, "Sean Davis" <sdavis2 at mail.nih.gov> wrote:

> Francis
> 
> You just need to add a zlim parameter to your maImage call.  For example, if
> the minimum expression is 20 (across foreground and background) and the max
> expression is 10000 (again, across foreground and background), issuing the
> commands:
> 
> maImage(christian.raw[,1],x="maGf",xlim=c(20,10000))
> 
> and 
> 
> maImage(christian.raw[,1],x="maGb",xlim=c(20,10000))
> 
> Will get you plots that have the same scale varying from 20 to 10000.
> 
> Sean