[BioC] Quality checks / flagging

[Tan, MinHan]

Hi,
 
Sorry - this sounds like a rather elementary question - but is there any
way I can read in selected columns into the marrayRaw object using
read.genepix? (e.g. % > B532+2SD)
 
Instead of performing quality flagging in GenePix, I was wondering how
to achieve the same thing in R.
 
Thank you!
 
Regards,
Min-Han

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