[BioC] Histogram and boxplot of MM data

[James MacDonald]

By default, boxplot uses both PM and MM data, and hist uses PM data. You
can change what you want to plot using with (e.g., if you want MM data,
call boxplot(abatch, with="MM"))

HTH,

Jim



James W. MacDonald
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623

>>> <donghu at itsa.ucsf.edu> 10/07/03 08:18PM >>>
Hi,

In Bioconductor, what data does "hist" or "boxplot" use by default? 
Is
it PM data?  How can I make similar plots with MM data?  Thanks.

Donglei Hu

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