[Bioc-sig-seq] Rsamtools

Steve Lianoglou mailinglist.honeypot at gmail.com
Tue Jan 26 15:58:55 CET 2010


On Tue, Jan 26, 2010 at 9:41 AM, Aurelie Laugraud <laugraud at prabi.fr> wrote:
> Dear all,
> I have read about Rsamtools being in dev repositories and advices about waiting for it to be stable to use it ...
> my question is therefore how long before it comes as a "regular"  R package ? Or is that that awful to make the dev version working ?
> I am using mac os X 10.6.2

For what it's worth, I'm using the version of Rsamtools from SVN in
order to read BAM files, and it works "as advertised". Note that this
means you (should be) using R 2.11 (you can get it from here:


Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact

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