[Bioc-sig-seq] Rsamtools

[Martin Morgan]

On 01/26/2010 06:41 AM, Aurelie Laugraud wrote:
> Dear all, 
> I have read about Rsamtools being in dev repositories and advices about waiting for it to be stable to use it ...
> my question is therefore how long before it comes as a "regular"  R package ? Or is that that awful to make the dev version working ?
> I am using mac os X 10.6.2

Oops, pressed the send button a little quickly.

The intention is that Rsamtools will be ready for inclusion in the next
release of Bioconductor. That release hasn't been scheduled, but is
usually in the April time frame.

Rsamtools is available for the 'devel' version of R using svn

  http://wiki.fhcrc.org/bioc/SvnHowTo
  https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Rsamtools

Martin

> 
> Thanks a lot
> 
> Aurélie 
> 
> --
> Aurelie Laugraud
> Fondation Synergie Lyon Cancer
> Centre Leon Berard
> 0426556711
> laugraud at lyon.fnclcc.fr
> 
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-- 
Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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