[Bioc-devel] Developer access to BayesSpace on BioConductor

[Gottardo Raphael]

I think we should put Senbai and Edward if possible, if not just Senbai. It would be easier, and he can check in with Ed.

Thanks Matt!

On 2 Jun 2025, at 15:12, Matthew Stone <matthew.stone12 using gmail.com> wrote:

Hi,

I'm happy to verify this request.

Sorry for any associated trouble! FYI, I requested that maintainership be transferred to Ed Zhao last fall. Lori, would you be able to point us in the direction of someone on the core team who could follow up on that request? (Raphael, unless you think someone else should be designated as the new maintainer?)

Thanks,

Matt

On Mon, Jun 2, 2025 at 3:33 AM Gottardo Raphael <Raphael.Gottardo using chuv.ch<mailto:Raphael.Gottardo using chuv.ch>> wrote:
I have added Matt’s personal email to the thread. I am sure he will respond very quickly. But I agree that we may not need his validation.

Raphael

On 2 Jun 2025, at 09:28, Kang Senbai <Senbai.Kang using chuv.ch<mailto:Senbai.Kang using chuv.ch>> wrote:

Hi Lori,

It seems that Dr. Matt Stone’s email address has expired. Given that there is an error in BayesSpace to be fixed urgently, is it ok for you to proceed with Prof. Gottardo’s validation?

Thank you.

Best,
Senbai

CHUV
Lausanne University Hospital
Senbai KANG – Software Engineer
Biomedical Data Science Center
Directorate Innovation and Clinical Research
Office BU21/05/234
Rue du Bugnon 21,CP 50, CH-1011 Lausanne
senbai.kang using chuv.ch<mailto:senbai.kang using chuv.ch>
www.chuv.ch<http://www.chuv.ch/>
www.chuv.ch/bdsc<http://www.chuv.ch/bdsc>


From: Kang Senbai <Senbai.Kang using chuv.ch<mailto:Senbai.Kang using chuv.ch>>
Date: Friday, 30 May 2025 at 12:24
To: "Kern, Lori" <Lori.Shepherd using RoswellPark.org>, "bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>" <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>, "mstone using fredhutch.org<mailto:mstone using fredhutch.org>" <mstone using fredhutch.org<mailto:mstone using fredhutch.org>>
Cc: Gottardo Raphael <Raphael.Gottardo using chuv.ch<mailto:Raphael.Gottardo using chuv.ch>>
Subject: Re: Developer access to BayesSpace on BioConductor

Hi Lori,

Thank you for your reply. I am also copying this to Prof. Gottardo.

Best,
Senbai

CHUV
Lausanne University Hospital
Senbai KANG – Software Engineer
Biomedical Data Science Center
Directorate Innovation and Clinical Research
Office BU21/05/234
Rue du Bugnon 21,CP 50, CH-1011 Lausanne
senbai.kang using chuv.ch<mailto:senbai.kang using chuv.ch>
www.chuv.ch<http://www.chuv.ch/>
www.chuv.ch/bdsc<http://www.chuv.ch/bdsc>


From: "Kern, Lori" <Lori.Shepherd using RoswellPark.org>
Date: Thursday, 29 May 2025 at 13:32
To: Kang Senbai <Senbai.Kang using chuv.ch<mailto:Senbai.Kang using chuv.ch>>, "bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>" <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>, "mstone using fredhutch.org<mailto:mstone using fredhutch.org>" <mstone using fredhutch.org<mailto:mstone using fredhutch.org>>
Subject: Re: Developer access to BayesSpace on BioConductor

Could we please have Matt Stone the currently listed maintainer verify this request.


Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> on behalf of Kang Senbai <Senbai.Kang using chuv.ch<mailto:Senbai.Kang using chuv.ch>>
Sent: Wednesday, May 28, 2025 11:41 AM
To: bioc-devel using r-project.org<mailto:bioc-devel using r-project.org> <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
Subject: [Bioc-devel] Developer access to BayesSpace on BioConductor

Hello,

I am reaching out to register myself as an additional developer of BayesSpace<https://secure-web.cisco.com/1VUtB43zaLEpxtcZLQSJebounlJg0BFZLhvww9b5yubQI3mcf4NzaDwRru8w3T_J4-zV6fFTDxRO_6gwRd2UaOF9eleCHSEkuKhjHnPbARxqDyEsb1xz5Ao_TqeI0EdSo_g_SegObQpVqIGZBE-F4t00MtGcW-5lyn9azKVCjUbceZqivopaYBHtMvoEr-9ZhpuLhjb1B6QXeB5NXzkGkn7HpCldZyRqkjp200nDuem3ZPDl8fs0O-QldE67CAOx9YGNRNFhx57UhtNd6pm-8kpNYiNTTUQ0gKW67tURh18dfm_IWcpnTeJ0TiqqNGYxi/https%3A%2F%2Fwww.bioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FBayesSpace.html>. I am already one of the maintainers listed in the project by Edward Zhao.

My public ssh key is available on github: https://secure-web.cisco.com/1drsOxG1LAsRi8D12Mle_BRAONP3GRfsUUnVNjfJJNtD-egqRJWxY2p7KBQJSv9SlB7NxMQP2qyULz0MJ6k5_k8z_0qIiVTjZSSvOe9deZO3A5xTXtRIMH-ZTIyHH8U7QYUOiQmlEYO58EJjG4VPI3fwNpl4Ueywqe2g4tfFb8RESHyrqByxXcpO9DVEjb6nX6-6fHG8Huxlt47mKTWgtaHF-dQjjYwoLiRnQOGz_F1q0_Z7HjrHGh-L2bq9ChJMx5ITHuQyhM7IpHrp18cFL4V1kgNgL8xnlhVTcV-pTdDpGrfABZzPeMlaWeTNot7Uk/https%3A%2F%2Fgithub.com%2Fsenbaikang.keys

Please let me know if you need further information.

Best,
Senbai
CHUV
Lausanne University Hospital
Senbai KANG – Software Engineer
Biomedical Data Science Center
Directorate Innovation and Clinical Research
Office BU21/05/234
Rue du Bugnon 21,CP 50, CH-1011 Lausanne
senbai.kang using chuv.ch<mailto:senbai.kang using chuv.ch><mailto:senbai.kang using chuv.ch>
http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch<http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch><http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3chttp:/secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3e>
http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc<http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc><http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3chttp:/secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3e>


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