[Bioc-devel] Developer access to BayesSpace on BioConductor

Mon Jun 2 15:17:48 CEST 2025

No problem!

IIRC, a bioconductor package may have multiple authors but only a single
maintainer.

Lori, I approve of transferring maintainership to Senbai. Please let me
know if you need anything from me to facilitate this.

Thanks,

Matt

On Mon, Jun 2, 2025 at 9:14 AM Gottardo Raphael <Raphael.Gottardo using chuv.ch>
wrote:

> I think we should put Senbai and Edward if possible, if not just Senbai.
> It would be easier, and he can check in with Ed.
>
> Thanks Matt!
>
> On 2 Jun 2025, at 15:12, Matthew Stone <matthew.stone12 using gmail.com> wrote:
>
> Hi,
>
> I'm happy to verify this request.
>
> Sorry for any associated trouble! FYI, I requested that maintainership be
> transferred to Ed Zhao last fall. Lori, would you be able to point us in
> the direction of someone on the core team who could follow up on that
> request? (Raphael, unless you think someone else should be designated as
> the new maintainer?)
>
> Thanks,
>
> Matt
>
> On Mon, Jun 2, 2025 at 3:33 AM Gottardo Raphael <Raphael.Gottardo using chuv.ch>
> wrote:
>
>> I have added Matt’s personal email to the thread. I am sure he will
>> respond very quickly. But I agree that we may not need his validation.
>>
>> Raphael
>>
>> On 2 Jun 2025, at 09:28, Kang Senbai <Senbai.Kang using chuv.ch> wrote:
>>
>> Hi Lori,
>>
>> It seems that Dr. Matt Stone’s email address has expired. Given that
>> there is an error in BayesSpace to be fixed urgently, is it ok for you to
>> proceed with Prof. Gottardo’s validation?
>>
>> Thank you.
>>
>> Best,
>> Senbai
>>
>> *CHUV*
>> *Lausanne University Hospital*
>> *Senbai **KANG – Software Engineer*
>> Biomedical Data Science Center
>> Directorate Innovation and Clinical Research
>> Office BU21/05/234
>> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
>> senbai.kang using chuv.ch
>> www.chuv.ch
>> www.chuv.ch/bdsc
>>
>>
>> *From: *Kang Senbai <Senbai.Kang using chuv.ch>
>> *Date: *Friday, 30 May 2025 at 12:24
>> *To: *"Kern, Lori" <Lori.Shepherd using RoswellPark.org>, "
>> bioc-devel using r-project.org" <bioc-devel using r-project.org>, "
>> mstone using fredhutch.org" <mstone using fredhutch.org>
>> *Cc: *Gottardo Raphael <Raphael.Gottardo using chuv.ch>
>> *Subject: *Re: Developer access to BayesSpace on BioConductor
>>
>> Hi Lori,
>>
>> Thank you for your reply. I am also copying this to Prof. Gottardo.
>>
>> Best,
>> Senbai
>>
>> *CHUV*
>> *Lausanne University Hospital*
>> *Senbai **KANG – Software Engineer*
>> Biomedical Data Science Center
>> Directorate Innovation and Clinical Research
>> Office BU21/05/234
>> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
>> senbai.kang using chuv.ch
>> www.chuv.ch
>> www.chuv.ch/bdsc
>>
>>
>> *From: *"Kern, Lori" <Lori.Shepherd using RoswellPark.org>
>> *Date: *Thursday, 29 May 2025 at 13:32
>> *To: *Kang Senbai <Senbai.Kang using chuv.ch>, "bioc-devel using r-project.org" <
>> bioc-devel using r-project.org>, "mstone using fredhutch.org" <mstone using fredhutch.org>
>> *Subject: *Re: Developer access to BayesSpace on BioConductor
>>
>> Could we please have Matt Stone the currently listed maintainer verify
>> this request.
>>
>>
>> Lori Shepherd - Kern
>>
>> Bioconductor Core Team
>>
>> Roswell Park Comprehensive Cancer Center
>>
>> Department of Biostatistics & Bioinformatics
>>
>> Elm & Carlton Streets
>>
>> Buffalo, New York 14263
>> ------------------------------
>> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Kang
>> Senbai <Senbai.Kang using chuv.ch>
>> *Sent:* Wednesday, May 28, 2025 11:41 AM
>> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
>> *Subject:* [Bioc-devel] Developer access to BayesSpace on BioConductor
>>
>> Hello,
>>
>> I am reaching out to register myself as an additional developer of
>> BayesSpace<
>> https://secure-web.cisco.com/1VUtB43zaLEpxtcZLQSJebounlJg0BFZLhvww9b5yubQI3mcf4NzaDwRru8w3T_J4-zV6fFTDxRO_6gwRd2UaOF9eleCHSEkuKhjHnPbARxqDyEsb1xz5Ao_TqeI0EdSo_g_SegObQpVqIGZBE-F4t00MtGcW-5lyn9azKVCjUbceZqivopaYBHtMvoEr-9ZhpuLhjb1B6QXeB5NXzkGkn7HpCldZyRqkjp200nDuem3ZPDl8fs0O-QldE67CAOx9YGNRNFhx57UhtNd6pm-8kpNYiNTTUQ0gKW67tURh18dfm_IWcpnTeJ0TiqqNGYxi/https%3A%2F%2Fwww.bioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FBayesSpace.html>.
>> I am already one of the maintainers listed in the project by Edward Zhao.
>>
>> My public ssh key is available on github:
>> https://secure-web.cisco.com/1drsOxG1LAsRi8D12Mle_BRAONP3GRfsUUnVNjfJJNtD-egqRJWxY2p7KBQJSv9SlB7NxMQP2qyULz0MJ6k5_k8z_0qIiVTjZSSvOe9deZO3A5xTXtRIMH-ZTIyHH8U7QYUOiQmlEYO58EJjG4VPI3fwNpl4Ueywqe2g4tfFb8RESHyrqByxXcpO9DVEjb6nX6-6fHG8Huxlt47mKTWgtaHF-dQjjYwoLiRnQOGz_F1q0_Z7HjrHGh-L2bq9ChJMx5ITHuQyhM7IpHrp18cFL4V1kgNgL8xnlhVTcV-pTdDpGrfABZzPeMlaWeTNot7Uk/https%3A%2F%2Fgithub.com%2Fsenbaikang.keys
>>
>> Please let me know if you need further information.
>>
>> Best,
>> Senbai
>> CHUV
>> Lausanne University Hospital
>> Senbai KANG – Software Engineer
>> Biomedical Data Science Center
>> Directorate Innovation and Clinical Research
>> Office BU21/05/234
>> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
>> senbai.kang using chuv.ch<mailto:senbai.kang using chuv.ch <senbai.kang using chuv.ch>>
>>
>> http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch<http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch>
>> <http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3chttp:/secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3e>
>>
>> http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc<http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc>
>> <http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3chttp:/secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3e>
>>
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