[Bioc-devel] Developer access to BayesSpace on BioConductor

Mon Jun 2 15:12:15 CEST 2025

Hi,

I'm happy to verify this request.

Sorry for any associated trouble! FYI, I requested that maintainership be
transferred to Ed Zhao last fall. Lori, would you be able to point us in
the direction of someone on the core team who could follow up on that
request? (Raphael, unless you think someone else should be designated as
the new maintainer?)

Thanks,

Matt

On Mon, Jun 2, 2025 at 3:33 AM Gottardo Raphael <Raphael.Gottardo using chuv.ch>
wrote:

> I have added Matt’s personal email to the thread. I am sure he will
> respond very quickly. But I agree that we may not need his validation.
>
> Raphael
>
> On 2 Jun 2025, at 09:28, Kang Senbai <Senbai.Kang using chuv.ch> wrote:
>
> Hi Lori,
>
> It seems that Dr. Matt Stone’s email address has expired. Given that there
> is an error in BayesSpace to be fixed urgently, is it ok for you to proceed
> with Prof. Gottardo’s validation?
>
> Thank you.
>
> Best,
> Senbai
>
> *CHUV*
> *Lausanne University Hospital*
> *Senbai **KANG – Software Engineer*
> Biomedical Data Science Center
> Directorate Innovation and Clinical Research
> Office BU21/05/234
> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
> senbai.kang using chuv.ch
> www.chuv.ch
> www.chuv.ch/bdsc
>
>
> *From: *Kang Senbai <Senbai.Kang using chuv.ch>
> *Date: *Friday, 30 May 2025 at 12:24
> *To: *"Kern, Lori" <Lori.Shepherd using RoswellPark.org>, "
> bioc-devel using r-project.org" <bioc-devel using r-project.org>, "
> mstone using fredhutch.org" <mstone using fredhutch.org>
> *Cc: *Gottardo Raphael <Raphael.Gottardo using chuv.ch>
> *Subject: *Re: Developer access to BayesSpace on BioConductor
>
> Hi Lori,
>
> Thank you for your reply. I am also copying this to Prof. Gottardo.
>
> Best,
> Senbai
>
> *CHUV*
> *Lausanne University Hospital*
> *Senbai **KANG – Software Engineer*
> Biomedical Data Science Center
> Directorate Innovation and Clinical Research
> Office BU21/05/234
> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
> senbai.kang using chuv.ch
> www.chuv.ch
> www.chuv.ch/bdsc
>
>
> *From: *"Kern, Lori" <Lori.Shepherd using RoswellPark.org>
> *Date: *Thursday, 29 May 2025 at 13:32
> *To: *Kang Senbai <Senbai.Kang using chuv.ch>, "bioc-devel using r-project.org" <
> bioc-devel using r-project.org>, "mstone using fredhutch.org" <mstone using fredhutch.org>
> *Subject: *Re: Developer access to BayesSpace on BioConductor
>
> Could we please have Matt Stone the currently listed maintainer verify
> this request.
>
>
> Lori Shepherd - Kern
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Kang
> Senbai <Senbai.Kang using chuv.ch>
> *Sent:* Wednesday, May 28, 2025 11:41 AM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] Developer access to BayesSpace on BioConductor
>
> Hello,
>
> I am reaching out to register myself as an additional developer of
> BayesSpace<
> https://secure-web.cisco.com/1VUtB43zaLEpxtcZLQSJebounlJg0BFZLhvww9b5yubQI3mcf4NzaDwRru8w3T_J4-zV6fFTDxRO_6gwRd2UaOF9eleCHSEkuKhjHnPbARxqDyEsb1xz5Ao_TqeI0EdSo_g_SegObQpVqIGZBE-F4t00MtGcW-5lyn9azKVCjUbceZqivopaYBHtMvoEr-9ZhpuLhjb1B6QXeB5NXzkGkn7HpCldZyRqkjp200nDuem3ZPDl8fs0O-QldE67CAOx9YGNRNFhx57UhtNd6pm-8kpNYiNTTUQ0gKW67tURh18dfm_IWcpnTeJ0TiqqNGYxi/https%3A%2F%2Fwww.bioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FBayesSpace.html>.
> I am already one of the maintainers listed in the project by Edward Zhao.
>
> My public ssh key is available on github:
> https://secure-web.cisco.com/1drsOxG1LAsRi8D12Mle_BRAONP3GRfsUUnVNjfJJNtD-egqRJWxY2p7KBQJSv9SlB7NxMQP2qyULz0MJ6k5_k8z_0qIiVTjZSSvOe9deZO3A5xTXtRIMH-ZTIyHH8U7QYUOiQmlEYO58EJjG4VPI3fwNpl4Ueywqe2g4tfFb8RESHyrqByxXcpO9DVEjb6nX6-6fHG8Huxlt47mKTWgtaHF-dQjjYwoLiRnQOGz_F1q0_Z7HjrHGh-L2bq9ChJMx5ITHuQyhM7IpHrp18cFL4V1kgNgL8xnlhVTcV-pTdDpGrfABZzPeMlaWeTNot7Uk/https%3A%2F%2Fgithub.com%2Fsenbaikang.keys
>
> Please let me know if you need further information.
>
> Best,
> Senbai
> CHUV
> Lausanne University Hospital
> Senbai KANG – Software Engineer
> Biomedical Data Science Center
> Directorate Innovation and Clinical Research
> Office BU21/05/234
> Rue du Bugnon 21,CP 50, CH-1011 Lausanne
> senbai.kang using chuv.ch<mailto:senbai.kang using chuv.ch <senbai.kang using chuv.ch>>
>
> http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch<http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch>
> <http://secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3chttp:/secure-web.cisco.com/1OS__-hCqVjQJSF06LSWZWXGmR6dwzxKcgwX6_5AlpipjIVPiQFeEoeZpgs_IxKJvLfU8XADswZWTYFaqvi3cc0aaRrlqT99AkLM2Yv9N9EiKxzrWmtXG6xT5PnPubhWLcx3bv1q2XtISoihpgwZhnU1tS7LJlUDD3GaiPcMAcIxPc-pEYxjuqjB0M0pcFoErwpOGwnBu60zufUP8x4KfE0OBFj4PTFrLd16i0EYO9LilBGaN_kdYWclsVLnYztr7SemU08RINfAVYMW3eJ35hR2bRPdTDwkJXFbq-xLiRKNnXRtKQ_tKWtrvhe7luX_D/http%3A%2F%2Fwww.chuv.ch%3e>
>
> http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc<http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc>
> <http://secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3chttp:/secure-web.cisco.com/1pYw0SQqR8uuCG4tgMTKbjGW5t6VquT61KL_Dw9mtpuqTmY4Rsa7BwBeeaVDHjdi0eirIS6kgkFTFOa2QKyLp9PKg-2BaVNnf5KXPCOB_VdAzzL_8WWfpFBpdgaxMVUhh0QiZhENikAB9QANOxhiEfJ9b0NJP2VSwFk0qvcWTaFcRnz7vVtX41SUEI7uqiKiWyBGdgUj7xlcCI7XqQh-3yimuOpdx4yQlIVEyovrTX8iF6dvNRLMdGj2PlnUY2peoAFX61YWgJrcw9yZjkLVacGwXOPAnBKyo0ocOykO6bRWv7iJUS6mmq3gV3KrFfIQ-/http%3A%2F%2Fwww.chuv.ch%2Fbdsc%3e>
>
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