[Bioc-devel] Having problems pushing changes to Bioconductor...

[Kern, Lori]

Could you please show the commands you are trying along with a
git remote -v


I've check the configuration on our end and everything looks correct. You'll need to make sure you are pointing to one of the uploaded ssh keys on the BiocCredentials account (or create a new one if you are on a different machine)
There is useful information found at
http://contributions.bioconductor.org/git-version-control.html#new-package-workflow

and a FAQ section
http://contributions.bioconductor.org/git-version-control.html#faq
See especially: #13, #14, and#15





Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Paul Brennan <brennanpincardiff using gmail.com>
Sent: Wednesday, March 6, 2024 9:00 AM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Having problems pushing changes to Bioconductor...

Sorry to bother you I feel as if I am asking a very stupid question but I
can't solve it on my own.

I am getting build errors and I worked out why (a failed test) and changed
my code on Github to correct this:
https://secure-web.cisco.com/1C-fx1Fhx9rZfPJTM0FHB-mLGMfkL6M96AEW9fEr4L0xDKiuAu--2umi29DrHFpl_pWRTIjKBCcIalvMrcKCt2WFZENpLe4QuvKhgBOx9FOmJ1VkGT_u2Tv-bmbWgK1bzBmO2mPC6LF_ZnTpUJjRkDpIsTOP-BtsjhP3a6yGUvmLlwtIfo1lMUD4Gl1ipcUIn7CVHqgGN2GERwAMmnTyqjQtg2yb1035kNIfkRFrK8s40RCrbUytSiymWgBBR8Exk1s3xX51m2KFuuiCSEk9Bhc0bxKl3CUW_V5exgMKWeQS9aGPOCh6NCLMQ6kSbtKPF/https%3A%2F%2Fgithub.com%2Fbrennanpincardiff%2FdrawProteins
I have checked R CMD Check and it is fine with no errors or warnings :-)

Now it is time to try to push these onto Bioconductor but I can't do this.
I've tried various sources and it seems the key point is that I haven't
organised the correct access rights to push upstream.

Can some one advise or point towards a resource that I can work with
please?

Thanks,
Paul

Paul Brennan
package maintainer for drawProteins
https://secure-web.cisco.com/1AJF0ylkW0LYxK_qOGPSaOg0tBDtXraJO8oy5e6dogibE4DF9ygkXszBgGnaEAuTrFGo8tVABQpcGRhBGJi9SSrdtEVRh8gBIMdRVbgktq3CMRZeMflbYC9d5e_qX0SnD0y2A9PnkuC6gdiIW369zhL3MSRmVe0PjaYJGksjmc8O6tGYJo5LVpBjWefmt_eKLvyGwCEaBKxAo6V8iytwL4fjjFWGteiCsqbbIu6j-Hk3P3ABsPR6VryZv0WAqfOAjEpTBtuNxXP3ziZ4lc5nJxjjJLETQ9eerV-4QBseU5jxIACFREUJWt0g3Qzsnw24D/https%3A%2F%2Fbioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FdrawProteins.html
which is giving a build error.

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