[Bioc-devel] Devel build report errors

[Martin Grigorov]

Hi,


On Mon, 8 Jul 2024 at 11:14, Rodrigo Arcoverde Cerveira <
rodrigo.arcoverdi using gmail.com> wrote:

> Hi all,
>
> We are trying to implement a new tool in scifer package, and I have a few
> questions about compatibility and build reports.
>
>   1.  I am getting the following error in build for Linux (openEuler 22.03
> LTS-SP1) / aarch64.
>
> ```
>
> error: dependency ‘sangerseqR’ is not available for package ‘scifer’
>
> ```
>
> However, when I check the devel build report for sangerseqR it seems to be
> passing without errors and only its dependent packages are getting this
> error.


I will check what’s issue on openEuler!
The installation of some packages timed out after the update of R to 4.4.1.
Everything should be back to normal in the next few days!


>
>   1.  Besides that, we are having the same error in Windows and macOS
> 13.6.5 Ventura. This new function we are trying to implement relies on a
> conda environment (basilisk). The issue is that the packages we need in
> conda are not available for all the platforms so I get an error that the
> packages we need are not found.
>
> ```
>
> PackagesNotFoundError: The following packages are not available from
> current channels:
>
>
>
>   - dnaio=1.2.1
>
>   - igblast=1.22.0
>
> ```
>
>   1.  Finally, is it mandatory to be compatible with windows?
>
> Hope someone can help 😃
>
> Best regards,
> Rodrigo
>
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>
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