[Bioc-devel] Devel build report errors

Rodrigo Arcoverde Cerveira rodr|go@@rcoverd| @end|ng |rom gm@||@com
Mon Jul 8 10:14:17 CEST 2024


Hi all,

We are trying to implement a new tool in scifer package, and I have a few questions about compatibility and build reports.

  1.  I am getting the following error in build for Linux (openEuler 22.03 LTS-SP1) / aarch64.

```

error: dependency ‘sangerseqR’ is not available for package ‘scifer’

```

However, when I check the devel build report for sangerseqR it seems to be passing without errors and only its dependent packages are getting this error.

  1.  Besides that, we are having the same error in Windows and macOS 13.6.5 Ventura. This new function we are trying to implement relies on a conda environment (basilisk). The issue is that the packages we need in conda are not available for all the platforms so I get an error that the packages we need are not found.

```

PackagesNotFoundError: The following packages are not available from current channels:



  - dnaio=1.2.1

  - igblast=1.22.0

```

  1.  Finally, is it mandatory to be compatible with windows?

Hope someone can help 😃

Best regards,
Rodrigo

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