[Bioc-devel] Urgent minor deployment of a release?
Robert M. Flight
r|||ght79 @end|ng |rom gm@||@com
Tue Jun 20 01:29:42 CEST 2023
I'd also add, that I've had a version of a package that specifically
implemented things just for a manuscript, because they were kind of hackish
implementations to prove that it was possible. I made that available in a
specific branch of the package code on GitHub, and an archived version on
figshare, and none of the reviewers expressed any issues with it.
Best of luck with the manuscript and package!
Dr. Robert M Flight, PhD
Bioinformatics Analyst Senior
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Moseley Bioinformatics Lab
Resource Center for Stable Isotope Resolved Metabolomics
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On Mon, Jun 19, 2023 at 3:30 PM Neumann, Steffen <sneumann using ipb-halle.de>
> ... And as a reviewer I'd never have an issue if a paper describes
> something and mentions in which Version (x.y.z) it is released,
> regardless in what BioC release/devel that is.
> On Mon, 2023-06-19 at 11:46 -0400, Vincent Carey wrote:
> > Hi Adam, thanks for your note.
> > Changes to release branch sources must be limited to bug fixes or doc
> > improvement. Any new features
> > must be introduced only in the devel branch. Any features to be
> > removed
> > must be indicated as
> > deprecated for one release and then labeled as defunct. See
> > http://contributions.bioconductor.org/deprecation.html
> > for guidance on feature removal.
> > On Mon, Jun 19, 2023 at 10:11 AM Park, Adam Keebum
> > <sein.park using psu.edu>
> > wrote:
> > > Hi all,
> > >
> > > I wonder if there is any room for deploying a modification to a
> > > released
> > > library(retrofit, 3.17), which was released last month.
> > >
> > > We are in a progress of a paper review, so the release schedule
> > > (twice
> > > each year) does not perfectly fit our need.
> > >
> > > Or do you think we should have used "devel" for such purposes?
> > >
> > > Sincerely,
> > > Adam.
> > >
> > > [[alternative HTML version deleted]]
> > >
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