[Bioc-devel] Urgent minor deployment of a release?

[Robert M. Flight]

I'd also add, that I've had a version of a package that specifically
implemented things just for a manuscript, because they were kind of hackish
implementations to prove that it was possible. I made that available in a
specific branch of the package code on GitHub, and an archived version on
figshare, and none of the reviewers expressed any issues with it.

Best of luck with the manuscript and package!

-Robert

------------------------------------------
Dr. Robert M Flight, PhD
Bioinformatics Analyst Senior
Puller of Rabbits from Hats
Research Parasite
Moseley Bioinformatics Lab
Resource Center for Stable Isotope Resolved Metabolomics
Manager, Systems Biology and Omics Integration Journal Club
Markey Cancer Center
CC434 Roach Building
University of Kentucky
Lexington, KY

Mastodon: https://mastodon.social/@rmflight
Web: https://rmflight.github.io
ORCID: http://orcid.org/0000-0001-8141-7788
EM rflight79 using gmail.com
PH 502-509-1827 <(502)%20509-1827>

The most powerful weapon in the hands of the oppressor is the mind of the
oppressed. Biko (1978), from Birhane & Guest, Towards decolonising
computational sciences, https://arxiv.org/pdf/2009.14258.pdf

On Mon, Jun 19, 2023 at 3:30 PM Neumann, Steffen <sneumann using ipb-halle.de>
wrote:

> ... And as a reviewer I'd never have an issue if a paper describes
> something and mentions in which Version (x.y.z) it is released,
> regardless in what BioC release/devel that is.
>
> Yours,
> Steffen
>
>
>
>
> On Mon, 2023-06-19 at 11:46 -0400, Vincent Carey wrote:
> > Hi Adam, thanks for your note.
> >
> > Changes to release branch sources must be limited to bug fixes or doc
> > improvement.  Any new features
> > must be introduced only in the devel branch.  Any features to be
> > removed
> > must be indicated as
> > deprecated for one release and then labeled as defunct.  See
> >
> > http://contributions.bioconductor.org/deprecation.html
> >
> > for guidance on feature removal.
> >
> >
> > On Mon, Jun 19, 2023 at 10:11 AM Park, Adam Keebum
> > <sein.park using psu.edu>
> > wrote:
> >
> > > Hi all,
> > >
> > > I wonder if there is any room for deploying a modification to a
> > > released
> > > library(retrofit, 3.17), which was released last month.
> > >
> > > We are in a progress of a paper review, so the release schedule
> > > (twice
> > > each year) does not perfectly fit our need.
> > >
> > > Or do you think we should have used "devel" for such purposes?
> > >
> > > Sincerely,
> > > Adam.
> > >
> > >         [[alternative HTML version deleted]]
> > >
> > > _______________________________________________
> > > Bioc-devel using r-project.org mailing list
> > > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> > >
> >
>
> --
> IPB is hiring:
> * Research associate (computational metabolomics)
> https://www.ipb-halle.de/en/career/job-vacancies/joboffer-
> detail/wissenschaftliche-r-mitarbeiter-in-computational-metabolomics-
> mwd/
>
> Upcoming events:
> * ELIXIR AllHands 5.-8.06.2023 @ Dublin Convention Centre, Ireland
>   https://elixir-europe.org/events/elixir-all-hands-2023
> * CoRDI 2023, 12.-14.09.2023 @ Karlsruhe
>   https://www.nfdi.de/cordi-2023/?lang=en
>
>
> ---
> IPB Halle                    Computational Plant Biochemistry (CPB)
> Dr. Steffen Neumann          http://www.ipb-halle.de/
> Weinberg 3                   Tel. +49 (0) 345 5582 - 1470
> 06120 Halle                       +49 (0) 345 5582 - 0
> sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409
>
>
>
>
>
>
>
>
>
>
>
>
>
> _______________________________________________
> Bioc-devel using r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

	[[alternative HTML version deleted]]