[Bioc-devel] riesling1: some package that install, build, check, and build bin OK, shown in red

Wed Jul 7 16:22:49 CEST 2021

Thanks Martin and Lori, and sorry for the noise: it did not occur to me to
mouse over the red dot.

Best,

R.

On Wed, 07-July-2021, at 16:06:15, Martin Morgan <mtmorgan.bioc using gmail.com> wrote:
> Mousing over the red dot provides an explanation, e.g., for OncoSimulR "NO, package depends on 'Rgraphviz' which is not available." Rgraphviz is indeed failing on all three platforms, but from the landing page it has propagated some time this release for Linux and macOS and so OncoSimulR can also propagate for these platforms.
>
> Martin
>
> On 7/7/21, 8:15 AM, "Bioc-devel on behalf of Kern, Lori" <bioc-devel-bounces using r-project.org on behalf of Lori.Shepherd using RoswellPark.org> wrote:
>
>     Normally the red dot prevents propagation due to conditions that would not allow the package to function properly such as dependencies not being available, or a requested version of a package is not yet available.
>
>
>
>
>     Lori Shepherd
>
>     Bioconductor Core Team
>
>     Roswell Park Comprehensive Cancer Center
>
>     Department of Biostatistics & Bioinformatics
>
>     Elm & Carlton Streets
>
>     Buffalo, New York 14263
>
>     ________________________________
>     From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Ramon Diaz-Uriarte <rdiaz02 using gmail.com>
>     Sent: Wednesday, July 7, 2021 7:18 AM
>     To: bioc-devel using r-project.org <bioc-devel using r-project.org>
>     Cc: r.diaz using uam.es <r.diaz using uam.es>
>     Subject: [Bioc-devel] riesling1: some package that install, build, check, and build bin OK, shown in red
>
>
>     Dear All,
>
>     In BioC 3.14, with riesling1, some packages that are shown as OK in
>     Install, Build, Check, and Build bin, show, however a red dot, and have no
>     zip. Some examples are (the first one I maintain; the rest I just picked randomly):
>
>
>     https://secure-web.cisco.com/1LPZs4_m-Sjb7J2OF7hSci9uIIDVRJ8EVLBRY5CDKrIIZJcqZhLRy9txHMsJSf3DZNBBjTnO_yfRvSBnhX3IO-f09R9EaqerV4QjLjvGXOGu6oKf4paevsbGSTPv8mt-iHp2u9hxbkOyBarn1-t2ZgZF10KG11gkBQzvPhQnZaiDKZ4mnEcyBW0wQ6oR4hl11MLnN_rFOa269LUWu4C7tn6kiKGi5x4bs0z2cIW0N3s4s6nGkaoSty1Rw_8kQt1c8QyARYiLejJ_akIGtJmb-U0IMIw9JZKsideOakLD1sbW0cUR8D_VRD37mCqApuOCs/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2FOncoSimulR%2F
>
>     https://secure-web.cisco.com/1TRr0mW7EHxnAYu4mZ5EPOhrFQVMMYiQUcymMf8unAW28HCPCv37EpvgSaY-Bd4kEvhtgBxJTfZONOY7Jyo7VC8Ijr2SvX_kRsJx_JPTrv9pyy_KwACIkqHp7L-Ac_4-NCcPAiGt7ImmrJIYoIQaTRl1eHmtRhql169MLnuiG1nzuOw_3-xczfDnIfQ-pC_Ai0NeZpjiHMgxuG9VGKTdi3M1ycqUx7NowAZf9AzoHKN_l5sIZA1TG4hNX217UAzQbJrT3Q1hXB80USxwvXYXvDWUoHaMp8zgmbEnHUIxbqYwO6Wfm6yaIGjlMBTffuU9H/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2FAgiMicroRna%2F
>
>     https://secure-web.cisco.com/1o8SgTdbVVNhIQs7ivAccToqJB9V7H-m1eqm66Y_pd5WfYet1zq5M62Lt4ZSTpKgVvh_2jGS5BBMPfJATxys4HRK9_-Ee_IpWOiuKr1Jn9z4PBWtVN-Yl20WZI-AY1CITPqpUjZDR18kp1lZCa2lK32fCh4t2RIpcy4hFKBXhlgvV6tt08RCLN4h8SMo8BhBbY10wxyxiDzrylI7fqx93HNWO-UvbTqhuE9gnRx3DLS0ro-aZhWkLwTsAdG-GvMwhbFqqCUW6zzXY_i6kE0uAT9GD5wKNEgIjAPjLl9KWou5vQ5rq6kt7bj3e-m0NKPEC/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2Fggcyto%2F
>
>     https://secure-web.cisco.com/1Ftx9oH59Y_JxkuehpZFkdhFER7ELXhXyMw0uaFIOPZwX0gHe1RWKDg2vAvmhO0tfONpdhIwpZm3TuKSXjxgho07TtSBmd4ZeOWOCKP6ROUEWTMfrhv1T6cLUIZVkhyaw2uRL3FDLC6jpvrXbkLcbjiNOlEvdxlPlz2fkODOPfgrJlqtj-aLRu3B2qz7kYI5tgsZ2VW6jC9iTBmrLmjf6IozEfT2zXpDESMZhbYxDYKzvHpNYREJsvENg5DLTeGrc1xghizQs1lb0pvmBvm24uGI0LIsM-6PHEqGyFlUnmgWtJY7Ql4_FiFO8-7YpxC8V/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2Fheatmaps%2F
>
>     https://secure-web.cisco.com/1afzI3GqGX-mHX4DDarX2jd2AktznzSU20ieI1-qks8kUqPF-Yu3O0fIUwToXvz7VWZru6pRekTa-2QkCAM2CkRVAMEPrFzLR9DPblCGWSFz1LcGCMF3SOkk_3g4e7ACokDHq_zH6tdG-n2tBMTPqdXepqt-QpZ9G5a4Q_kbjlwZFPV5wcKxAPuarJqUWszExfP-Tor9VKSNxm35MEIsany-KZvlcRfb206YG_-XXO1b1PeTScWb29izYpeZVEDUAEDjVqTAQ9Bb3fPX-VM-SDscUcvUdNzvVG4VCMk_AqXOXRdGbdVGHrzT85H0xkS4I/https%3A%2F%2Fbioconductor.org%2FcheckResults%2Fdevel%2Fbioc-LATEST%2Fyarn%2F
>
>
>     This has been the case for at least a few days (weeks?). I can see no
>     obvious pattern, nor what could maintainers do to fix this.
>
>
>     Best,
>
>
>     R.
>
>     --
>     Ramon Diaz-Uriarte
>     Department of Biochemistry, Lab B-25
>     Facultad de Medicina
>     Universidad Aut�noma de Madrid
>     Arzobispo Morcillo, 4
>     28029 Madrid
>     Spain
>
>     Phone: +34-91-497-2412
>
>     Email: rdiaz02 using gmail.com
>            ramon.diaz using iib.uam.es
>
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-- 
Ramon Diaz-Uriarte
Department of Biochemistry, Lab B-25
Facultad de Medicina
Universidad Autónoma de Madrid 
Arzobispo Morcillo, 4
28029 Madrid
Spain

Phone: +34-91-497-2412

Email: rdiaz02 using gmail.com
       ramon.diaz using iib.uam.es

https://ligarto.org/rdiaz