[Bioc-devel] Adding new "DifferentialDNA3DStructure" to biocViews

[Tim Triche, Jr.]

Seconded 

HiC isn’t even very good at this 😁

--t

> On Apr 3, 2021, at 7:05 AM, Matthias Zytnicki <matthias.zytnicki using inrae.fr> wrote:
> 
> Dear everyone,
> 
> 
> First please accept my apologies if my request is not appropriate here.
> 
> If so, please suggest me how to proceed.
> 
> 
> I would like to suggest adding a new item in the biocViews:
> 
> ===
> 
> BiologicalQuestion -> DifferentialDNA3DStructure;
> 
> ===
> 
> The rationale is:
> 
>  *   There are already several biocViews starting with "Differential": DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, DifferentialSplicing.
>  *   The biocViews "DNA3DStructure" already exists.
>  *   I can spot at least 4 bioC package that would fit in this biocViews: diffHic, HiCcompare, multiHiCcompare, TADCompare, plus the ones I am not aware of (and I obviously would like to add one in a near future).
>  *   I expect several new packages in the fields: differential interactions, differential loops, differential TADs, etc.
> 
> The new biocView could be "DifferentialHiC", but I find it a bit too restrictive.
> 
> Best regards,
> 
> Matthias.
> 
>    [[alternative HTML version deleted]]
> 
> _______________________________________________
> Bioc-devel using r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel