[Bioc-devel] Resource temporarily unavailable error with rtracklayer

[Charles Plessy]

On 15/07/2020 10:53, Charles Plessy wrote:
> On 14/07/2020 19:56, Vincent Carey wrote:
>> Can you post an example dataset that triggers the error reproducibly?
> 
> here it is:
> 
> https://www.dropbox.com/s/ai9itm586clt4y9/gp.Rds?dl=0
> 
> It is a GPos object; interestingly I just realised that export.bw will 
> not crash if I convert it to GRanges first...

Dear Vincent and everybody,

as wrapping my GPos objects in a GRanges() call suppresses the error 
effectively, I wonder if I should just push a CAGEr update with that 
fix, or if it is more a bug in rtracklayer or GenomicRanges ?

Have a nice day,

Charles

-- 
Charles Plessy - - ~ ~ ~ ~ ~ ~~~~ ~ ~ ~ ~ ~ - - charles.plessy using oist.jp
Okinawa  Institute  of  Science  and  Technology  Graduate  University
Staff scientist in the Luscombe Unit - ~ - https://groups.oist.jp/grsu
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