[Bioc-devel] updating released version of package

James W. MacDonald jm@cdon @end|ng |rom uw@edu
Thu Dec 10 17:09:31 CET 2020


It looks like you bumped it just yesterday:

commit 5a9929aed33e40c11609f3d064b114d95d95e6cb
Author: Ted Natoli <ted.e.natoli using gmail.com>
Date:   Wed Dec 9 16:42:16 2020 -0500

    fixing version bump

commit accd8a5871fe38a8a1f63b32b4e79d2640e86792
Author: Ted Natoli <ted.e.natoli using gmail.com>
Date:   Wed Dec 9 16:32:47 2020 -0500

    update RELEASE version number

And it takes a while to propagate, so you are probably being too impatient.

Jim

On Thu, Dec 10, 2020 at 10:59 AM Ted Natoli <ted.e.natoli using gmail.com> wrote:

> Hi James,
>
> Thanks for the response. The corresponding changes were committed to the
> master branch on November 23. The development build report seems to be
> using the correct code, or at least close to it, as the most recent commit
> it shows there is from December 8. I did push to both github and
> bioconductor repos and I did bump the version number too, which is
> reflected in the development build report but not release.
>
> Here are links to the build reports if it's helpful.
>
> devel: https://bioconductor.org/checkResults/3.13/bioc-LATEST/cmapR/
> release: https://bioconductor.org/checkResults/3.12/bioc-LATEST/cmapR/
>
> Thanks again,
> Ted
>
> On Thu, Dec 10, 2020 at 10:41 AM James W. MacDonald <jmacdon using uw.edu>
> wrote:
>
>> Did you bump your version number? How long has it been since you
>> committed the changes? If you have a github repo, you remembered to push to
>> both the Bioconductor and GitHub repos?
>>
>> On Thu, Dec 10, 2020 at 10:19 AM Ted Natoli <ted.e.natoli using gmail.com>
>> wrote:
>>
>>> Hello all,
>>>
>>> I'm trying to update the released version of my package, cmapR, because
>>> one
>>> of the packages it depends on has been deprecated and hence install of
>>> cmapR now fails.
>>>
>>> I've followed the instructions here in order to get those changes over to
>>> the released version of the package:
>>>
>>> https://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/
>>>
>>> However, I don't see that the released version has been updated. Looking
>>> at
>>> the build reports, the latest commit reflected there is from before I
>>> made
>>> the code changes. How do I get these changes to propagate to the release
>>> branch?
>>>
>>> I'm sure I must be missing something very basic, but any help would be
>>> appreciated.
>>>
>>> Thanks in advance,
>>> Ted
>>>
>>>         [[alternative HTML version deleted]]
>>>
>>> _______________________________________________
>>> Bioc-devel using r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>>>
>>
>>
>> --
>> James W. MacDonald, M.S.
>> Biostatistician
>> University of Washington
>> Environmental and Occupational Health Sciences
>> 4225 Roosevelt Way NE, # 100
>> Seattle WA 98105-6099
>>
>

-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099

	[[alternative HTML version deleted]]



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