[Bioc-devel] Access issues to package fcoex

[Turaga, Nitesh]

Thanks for the information. This helped me resolve your issue quickly.

Please try again now.

Best,

Nitesh 

> On Apr 15, 2020, at 12:28 PM, Tiago Lubiana Alves <tiago.lubiana.alves using usp.br> wrote:
> 
> Thanks Nitesh,
> 
> Adding more information about the issue:
> 
> 1 - My remotes seem to be set up correctly. 
> 
> $ git remote -v 
>                                                                                       
> origin  git using github.com:csbl-usp/fcoex.git (fetch)                                                  
> origin  git using github.com:csbl-usp/fcoex.git (push)                                                   
> upstream        git using git.bioconductor.org:packages/fcoex.git (fetch)                                 
> upstream        git using git.bioconductor.org:packages/fcoex.git (push) 
> 
> 
> 2 - Push to origin works, push to remote does not. 
> 
> $ git push origin master                                                                              
> Everything up-to-date                                                                                 
>                      
> $ git push upstream master                                                                            
> FATAL: W any packages/fcoex lubianat DENIED by fallthru                                               
> (or you mis-spelled the reponame)                                                                     
> fatal: Could not read from remote repository.                                                         
>                                                                                                       
> Please make sure you have the correct access rights                                                   
> and the repository exists.                                                                            
>                                  
> 3 - I only have read access to the fcoex package. 
> $ ssh -T git using git.bioconductor.org
>  R  	packages/fcoex
> 
> 4 - The same command shows write access to the other packages I maintain.
> $ ssh -T git using git.bioconductor.org
>  R W	packages/FCBF
>  (...)
>  R W	packages/PubScore
> 
> 5 - I am the maintainer of all 3 packages above. 
> 
> For fcoex and PubScore, the original repo was sent from the csbl-usp (my laboratory) account: 
> - fcoex submission issue 
> - PubScore submission issue
> 
> For FCBF, the original repo was from the lubianat (my personal) account: 
> - FCBF submission issue
> 
> But I am nevertheless listed as the maintainer for all 3, with the same e-mail:
> - fcoex :  Maintainer: Tiago Lubiana <tiago.lubiana.alves at usp.br>
> - FCBF: Maintainer: Tiago Lubiana <tiago.lubiana.alves at usp.br> (which I have recently updated)
> - PubScore:  Maintainer: Tiago Lubiana <tiago.lubiana.alves at usp.br>
> 
> 6 - I have an ssh config file with the content: 
> 
> host git.bioconductor.org
>     HostName git.bioconductor.org
>     IdentityFile ~/.ssh/id_rsa.pub
>     User git
>     
> 9- The public ssh-key was copied and added to BiocCredentials, and should be functional.
> 
> xclip -sel clip < ~/.ssh/id_rsa.pub 
> When adding it to https://git.bioconductor.org/BiocCredentials/add_sshkey/ I get the error Ssh key with this Sshkey already exists. This is expected, as I had added it before.
> 
> 
> If there is anything else that would be important to check, please let me know and I will add. 
> 
> I am not super savvy with git too, and I already apologize for any basic mistakes.
> I am sorry for the trouble and thank you very much for your time and help.
> 
> Tiago
> 
> Tiago Lubiana, 
> MSc in Bioinformatics, University of São Paulo
> Computational Systems Biology Laboratory (CSBL)
> 
> 
> 
> 
> On Thu, Apr 9, 2020 at 2:01 PM Turaga, Nitesh <Nitesh.Turaga using roswellpark.org> wrote:
> We need more information,
> 
> http://bioconductor.org/developers/how-to/git/faq/ 
> 
> #13 and #14 in the FAQ are relevant to you.
> 
> Nitesh
> 
> > On Apr 9, 2020, at 12:39 PM, Tiago Lubiana Alves <tiago.lubiana.alves using usp.br> wrote:
> > 
> > Hello all,
> > 
> > I have recently made a few change to a package that I mantain, but I seem
> > to be currently unable to update the fcoex package.
> > 
> > Even though I am the maintainer (
> > http://bioconductor.org/packages/3.11/bioc/html/fcoex.html)  I do not have
> > access to it according to BiocCredentials:
> > 'tiago.lubiana.alves using usp.br' has access to the following packages:FCBF
> > PubScore
> > 
> > (and only those two) .
> > 
> > I believe that might be the reason why I am getting the error message when
> > I run git push upstream master:
> > 
> > FATAL: W any packages/fcoex lubianat DENIED by fallthru
> >> (or you mis-spelled the reponame)
> >> fatal: Could not read from remote repository.
> >> Please make sure you have the correct access rights and the repository
> >> exists.
> > 
> > 
> > Do you know why this might be occurring?
> > 
> > Thank you for your time,
> > Tiago
> > 
> > Tiago Lubiana,
> > MSc in Bioinformatics, University of São Paulo
> > *Computational Systems Biology Laboratory (CSBL)*
> > 
> >       [[alternative HTML version deleted]]
> > 
> > _______________________________________________
> > Bioc-devel using r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
> 
> 
> 
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