[Bioc-devel] Access issues to package fcoex

[Tiago Lubiana Alves]

Thanks Nitesh,

Adding more information about the issue:


*1 - My remotes seem to be set up correctly. *
*$ git remote -v *


origin  git using github.com:csbl-usp/fcoex.git (fetch)

origin  git using github.com:csbl-usp/fcoex.git (push)

upstream        git using git.bioconductor.org:packages/fcoex.git (fetch)

upstream        git using git.bioconductor.org:packages/fcoex.git (push)



*2 - Push to origin works, push to remote does not. *
*$ git push origin master  *

Everything up-to-date


*$ git push upstream master              *

FATAL: W any packages/fcoex lubianat DENIED by fallthru

(or you mis-spelled the reponame)

fatal: Could not read from remote repository.



Please make sure you have the correct access rights

and the repository exists.


*3 - I only have read access to the fcoex package. *

*$ ssh -T git using git.bioconductor.org <git using git.bioconductor.org>*
 R   packages/fcoex

*4 - The same command shows write access to the other packages I maintain.*

*$ ssh -T git using git.bioconductor.org <git using git.bioconductor.org>* R W
packages/FCBF
 (...)
 R W packages/PubScore

*5 - I am the maintainer of all 3 packages above. *

For fcoex and PubScore, the original repo was sent from the csbl-usp
<https://github.com/csbl-usp> (my laboratory) account:
- fcoex submission issue
<https://github.com/Bioconductor/Contributions/issues/1241>
- PubScore submission issue
<https://github.com/Bioconductor/Contributions/issues/1312>

For FCBF, the original repo was from the lubianat
<https://github.com/lubianat> (my personal) account:
- FCBF submission issue
<https://github.com/Bioconductor/Contributions/issues/892>

But I am nevertheless listed as the maintainer for all 3, with the same
e-mail:
- fcoex <http://bioconductor.org/packages/3.11/bioc/html/fcoex.html> :
 Maintainer:
Tiago Lubiana <tiago.lubiana.alves at usp.br>
- FCBF <https://bioconductor.org/packages/3.11/bioc/html/FCBF.html>:
Maintainer:
Tiago Lubiana <tiago.lubiana.alves at usp.br> (which I have recently
updated)
- PubScore <https://bioconductor.org/packages/3.11/bioc/html/PubScore.html>
:  Maintainer: Tiago Lubiana <tiago.lubiana.alves at usp.br>

*6 - I have an ssh config file with the content: *

host git.bioconductor.org
    HostName git.bioconductor.org
    IdentityFile ~/.ssh/id_rsa.pub
    User git

*9- The public ssh-key was copied and added to BiocCredentials, and should
be functional.*

*xclip -sel clip < ~/.ssh/id_rsa.pub *
When adding it to https://git.bioconductor.org/BiocCredentials/add_sshkey/ I
get the error Ssh key with this Sshkey already exists. This is expected, as
I had added it before.


If there is anything else that would be important to check, please let me
know and I will add.

I am not super savvy with git too, and I already apologize for any basic
mistakes.
I am sorry for the trouble and thank you very much for your time and help.

Tiago

Tiago Lubiana,
MSc in Bioinformatics, University of São Paulo
*Computational Systems Biology Laboratory (CSBL)*




On Thu, Apr 9, 2020 at 2:01 PM Turaga, Nitesh <Nitesh.Turaga using roswellpark.org>
wrote:

> We need more information,
>
> http://bioconductor.org/developers/how-to/git/faq/
>
> #13 and #14 in the FAQ are relevant to you.
>
> Nitesh
>
> > On Apr 9, 2020, at 12:39 PM, Tiago Lubiana Alves <
> tiago.lubiana.alves using usp.br> wrote:
> >
> > Hello all,
> >
> > I have recently made a few change to a package that I mantain, but I seem
> > to be currently unable to update the fcoex package.
> >
> > Even though I am the maintainer (
> > http://bioconductor.org/packages/3.11/bioc/html/fcoex.html)  I do not
> have
> > access to it according to BiocCredentials:
> > 'tiago.lubiana.alves using usp.br' has access to the following packages:FCBF
> > PubScore
> >
> > (and only those two) .
> >
> > I believe that might be the reason why I am getting the error message
> when
> > I run git push upstream master:
> >
> > FATAL: W any packages/fcoex lubianat DENIED by fallthru
> >> (or you mis-spelled the reponame)
> >> fatal: Could not read from remote repository.
> >> Please make sure you have the correct access rights and the repository
> >> exists.
> >
> >
> > Do you know why this might be occurring?
> >
> > Thank you for your time,
> > Tiago
> >
> > Tiago Lubiana,
> > MSc in Bioinformatics, University of São Paulo
> > *Computational Systems Biology Laboratory (CSBL)*
> >
> >       [[alternative HTML version deleted]]
> >
> > _______________________________________________
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> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
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