[Bioc-devel] BiocManager not installing latest release version of DepecheR

[Martin Morgan]

Update your installation

  BiocManager::install(version = "3.10")

or see the vignette browseVignette("BiocManager") section 'Managing multiple versions" to manage multiple installations (in case you need to reproduce existing workflows).

Martin

On 11/13/19, 11:07 AM, "Bioc-devel on behalf of Jakob Theorell" <bioc-devel-bounces using r-project.org on behalf of jakob.theorell using ndcn.ox.ac.uk> wrote:

    Dear all,
    This is probably a mistake on my side, but I just now tried to install the last release version of DepecheR (for which I am the maintainer), and although the source package on BioConductor is 1.2, this is the text I get from BiocManager when installing:
    
    Bioconductor version 3.9 (BiocManager 1.30.9), R 3.6.1 (2019-07-05)
    Installing package(s) 'DepecheR'
    trying URL 'https://bioconductor.org/packages/3.9/bioc/bin/macosx/el-capitan/contrib/3.6/DepecheR_1.0.3.tgz'
    
    This is clearly the old version, that does not contain all the updates that the source package contains. Have I missed something I should have done to prevent this and what can I in that case do now?
    Best regards
    Jakob Theorell, MD/PhD
    Autoimmune Neurology Group
    Nuffield Department of Clinical Neurosciences
    University of Oxford
    
    
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