[Bioc-devel] mzR update in the making: any Travis experts ?

Ramos Perez, Marcel M@rce|@R@mo@Perez @end|ng |rom Ro@we||P@rk@org
Mon Mar 4 20:55:54 CET 2019


Hi Steffen,

I haven't played with it yet but Travis CI has an Artifacts addon that
will trigger
in the `after_script` or `after_failure` stages of the build and upload
log files to an AWS bucket.


You can see the details here:

https://docs.travis-ci.com/user/uploading-artifacts/


Best regards,

Marcel


On 3/4/19 2:34 PM, Neumann, Steffen wrote:
> Hi,
>
> TL;DR: How can I get to see the *.log files for more information ?!
>
> I am working on an upgrade of the C++ code in mzR,
> which is challenging to build cross-platform, 
> so we use travis to check before pushing/breaking BioC.
>
> The Travis config [1] is fairly simple, with main modification
> that we increase the timeouts. 
>
> Issue is, the builds in [2] e.g. don't give me enough information
> why the build fails. Build is OK:
>
>   Still running (9 of 40): R CMD build .
>   The command R CMD build . exited with 0.
>
> but check fails:
>
>   Still running (1 of 40): R CMD check --no-build-vignettes --no-
> vignettes mzR_2.17.1.tar.gz
>   The command R CMD check --no-build-vignettes --no-vignettes
> mzR_2.17.1.tar.gz exited with 1.
>
> and logs are not informative enough:
>
>   * checking whether package ‘mzR’ can be installed ... ERROR
>     Installation failed.
>     See ‘/home/travis/build/sneumann/mzR/mzR.Rcheck/00install.out’ for
> details.
>   * DONE
>     Status: 1 ERROR, 2 NOTEs
>     See ‘/home/travis/build/sneumann/mzR/mzR.Rcheck/00check.log’ for
> details.
>
> => How can I get to see the *.log files for more information ?!
>
> Thanks in advance, 
> Yours,
> Steffen
>
>
> [1] 
> https://github.com/sneumann/mzR/blob/feature/updatePwiz20190301/.travis.yml#L22
> [2] https://travis-ci.org/sneumann/mzR/branches
> [3] https://travis-ci.org/sneumann/mzR/builds/501622960
>
>


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